Property Calculation Prediction of general antibacterial activity Prediction of activity against specific microbial species Strain-specific AMP prediction based on microbial genome analysis
Prediction of activity against specific microbial species is a tool for predicting the antimicrobial potential of Linear AMPs against particular species. Active peptide exhibits MIC<25 µg/ml, and Non-Active peptide exhibits MIC>100 µg/ml. The species can be selected from the drop-down menu. The number of species will permanently rise. The length of the peptide should not exceed 30 amino acids. The server produces one of the two predictive values: positive predictive value (PPV) for peptides predicted as active and negative predictive value (NPV) for peptides predicted as not active. Taking into account that regarding the activity against Human erythrocytes, non-active peptides are considered positive, the server generates PPV for peptides not active against Human erythrocytes, and NPV – in another case.
Species:
Paste sequence(s) in FASTA format (the peptide sequence can contain the '+' sign to the end in case of C-terminal amidation):