General Prediction Special Prediction
NEW : Prediction of Linear AMPs against Candida albicans is added.
Special Prediction is a tool of prediction of Linear AMPs, which are active against particular species. Active peptide implies MIC<25 µg/ml. Non-Active peptide implies MIC>100 µg/ml. The species can be selected from drop-down menu. The number of species will be permanently risen. Length of the peptide should not exceed 30 amino acids. The server produces one of the two predictive values depending on the prediction: positive predictive value (PPV) for peptides predicted as active and negative predictive value (NPV) for peptides predicted as not active. Taking into account, that for the evaluation activity against Human erythrocytes, non-active peptides are considered as positive, the server gives PPV for peptides not active against Human erythrocytes, and NPV otherwise.
Species :
Paste sequence(s) in FASTA format ( '+' can be added to the end of the sequence in the case of C-Terminal amidation) :